Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880014.1_cds_XP_016437376.1_33143
CDS Infomation

[gene=LOC107763396] [db_xref=GeneID:107763396] [protein=probable cyclic nucleotide-gated ion channel 20, chloroplastic] [protein_id=XP_016437376.1] [location=join(5185..5688,7076..7267,8478..8576,9010..9147,9430..9678,10191..10481)] [gbkey=CDS]
Sequence

ATGGGAACTTCTGAAATAGATGAGATGCCGATGTTATCACCATCATATCCGCAGTCTAAT
GAAATTGATGGCTTTCAAAATCAACGTTTTGTGTACAGGACAAGGAGTGCATCCTTATCA
ATGCCAATGAGCTCTATGGATTCCTTTGGAGATGATAGCAGTTTTGTAGGCTATAATGGT
CCTTTGAGAAGTGAGGGGCGAACTTCATTGGTTCATATGAGCGGGCCATTGTATATTAGT
CACAAGCCTGAGAATAGCTCTCGGCCCACTCCCGCTGCAGTAGTGCACAAACCAACTCTG
CCAACAACGGAAAAATATCCTTCAATTGGTAGTGGAGAACAAAATGGTTGGCCTAATAAT
GACTACACTGGAAAAAATGAACATCTATTGAAGTCTGGTCAACTGGGCATGTGCAGTGAT
CCTTACTGCACAACATGCCCAACCGATAACCATTTGAAAGCACAAAAAAAAAGTTCAAAG
TTTTCAGATATGTTTGATCACCGGTTTCACAATATGCTGTATGGAGATACAAAAGGATGG
GCGGAGAGAACTTGTTCTTTCTTGCATCCATATATTCCTGGTGTCATGAATCCTCATGCG
AAGATTATCCAGAAGTGGAACAAATTTTTTGTCATCTCATGCCTATTTGCAGTATTTATA
GATCCCCTATTCTTCTTTGTGCTTAATGTCCAACAGGGGAACAACTGCATAGTGCTAAAT
TGGCCCATGACAAAAACTATTGTGATTTTGAGGAGCATCACTGATATCATTTACTTAGTG
CACATTCTTCTTCAGTTCCGCTTAGCTTATGTTGTTCCTGAATCTAGGGTGGTGGGAGCA
GGTGACCTGGTTGACCACCCTAAAAAGATTGCTGCAAATTATCTTTCTGGATACTTTGTT
ATTGACTTCTTTGTCGTACTACCACTTCCTCAGATCATCTTGTTGTTGGTTTTACCCAAG
TCTATTGGATCATCTGGGGTAAATTACGCGAAGAATCTATTGTGGGCAGCTATACTACTC
CAGTACAATTCTAGGTTGTACAGGATTTATTATTTGGTAGCTGGCCAGTCTCCAAGTGGT
TTTATATTTGAGTCGATATGGGCAACTTTTGTCATAAATCTTCTCATAATTGTTGTATCA
AGCAATATAGTGGGCTCATTGTGGTATCTTTTTGGTTTACAGAGGGTGAATCAATGCCTT
CAAGTTGCTTGTCGTAGCTCAAACATAGAAAGGTGTATGGAGTTCATAGACTGTGGTCAT
GGCACCGATTACACAAAGTTTCGGTCGGATATTACATGGGGCCAGTGGAAGAATTATACT
GATGCTTGTTTTACTGAAAGTAGTTTTGACTTTGGAATCTATAAACAAGCTGTTGATCTC
ACCACCGAACCGAGTGTTGTCACAAGATATGTGTACTCATTCTTTTGGGGCTTCCAGGTA
TATTTACCCAGCCTTTATGATTGTGGGACGTAA

Peptide Sequence

PEP ID

XP_016437376.1
PEP Infomation

PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Nicotiana tabacum]
Sequence

MGTSEIDEMPMLSPSYPQSNEIDGFQNQRFVYRTRSASLSMPMSSMDSFGDDSSFVGYNG
PLRSEGRTSLVHMSGPLYISHKPENSSRPTPAAVVHKPTLPTTEKYPSIGSGEQNGWPNN
DYTGKNEHLLKSGQLGMCSDPYCTTCPTDNHLKAQKKSSKFSDMFDHRFHNMLYGDTKGW
AERTCSFLHPYIPGVMNPHAKIIQKWNKFFVISCLFAVFIDPLFFFVLNVQQGNNCIVLN
WPMTKTIVILRSITDIIYLVHILLQFRLAYVVPESRVVGAGDLVDHPKKIAANYLSGYFV
IDFFVVLPLPQIILLLVLPKSIGSSGVNYAKNLLWAAILLQYNSRLYRIYYLVAGQSPSG
FIFESIWATFVINLLIIVVSSNIVGSLWYLFGLQRVNQCLQVACRSSNIERCMEFIDCGH
GTDYTKFRSDITWGQWKNYTDACFTESSFDFGIYKQAVDLTTEPSVVTRYVYSFFWGFQV
YLPSLYDCGT

Transcript Sequence

Gene sequence data has not been registered.